{ "_id": "6aea2512818c9e3ef6dbff00", "Package": "gatekeepR", "Title": "Reviewable Marker Gating and Phenotyping for Multiplexed Imaging", "Version": "1.1.0", "Authors@R": "person(\"R.\", \"Heller\",\nemail = \"raban.heller@uni-ulm.de\",\nrole = c(\"aut\", \"cre\", \"cph\"),\ncomment = c(ORCID = \"0000-0001-8006-9742\"))", "Description": "Turns per-cell marker measurements from multiplexed tissue\nimages into reviewed cell types and state calls. Declares a\nmarker panel and an ordered phenotype hierarchy as data,\ndecides per image whether each marker can be called at all, and\nestimates thresholds with documented methods (manual, density\nvalley, density tail, two-component Gaussian mixture,\npopulation density crossing on an embedding and parent-specific\ncrossing). A single classifier is shared by batch code and the\nreview application. 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