Package: hyperspectR
Title: Hyperspectral Imaging Analysis for Biomedical Applications
Version: 0.2.0.9000
Authors@R: c(
    person("R.", "Heller", email = "raban.heller@charite.de",
        role = c("aut", "cre"), comment = c(ORCID = "0000-0001-8006-9742")),
    person("V.", "Forstmeier", role = "aut"))
Description: Read, process, analyze, and visualize hyperspectral
        imaging (HSI) data from Cubert snapshot cameras and standard
        ENVI/TIFF formats. Provides calibration workflows (dark
        correction, white reference normalization), spectral
        preprocessing (Savitzky-Golay smoothing, SNV, MSC,
        derivatives), dimensionless spectral indices, research
        hemoglobin fraction fitting, dimensionality reduction (PCA,
        MNF), pixel classification (SAM, SVM, random forest), and
        constrained spectral unmixing. Includes an interactive 'shiny'
        explorer, reproducible batch recipes and grouped evaluation
        tools. Results are research outputs; clinical or
        device-specific accuracy is not established by the included
        synthetic examples.
License: MIT + file LICENSE
URL: https://github.com/cttir/hyperspectR,
        https://cttir.github.io/hyperspectR/
BugReports: https://github.com/cttir/hyperspectR/issues
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Config/testthat/edition: 3
Depends: R (>= 4.1.0)
Imports: rlang, cli, tibble, tidyr, ggplot2, stats, utils, grDevices,
        graphics, tools, patchwork, viridisLite, scales
Suggests: bslib, callr, shiny, dplyr, plotly, DT, terra, prospectr,
        signal, nnls, uwot, e1071, ranger, cuvis.r, tivis.r, withr,
        testthat (>= 3.0.0), knitr, rmarkdown, pkgdown, covr,
        shinytest2
Additional_repositories: https://cttir.r-universe.dev
VignetteBuilder: knitr
Config/Needs/website: CTTIR/themakR
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: libicu-dev
Repository: https://cttir.r-universe.dev
Date/Publication: 2026-10-14 10:37:51 UTC
RemoteUrl: https://github.com/CTTIR/hyperspectR
RemoteRef: HEAD
RemoteSha: 642fc056cd43bee6e41aa4cd3b849a279a698b53
NeedsCompilation: no
Packaged: 2026-10-14 14:53:07 UTC; root
Author: R. Heller [aut, cre] (ORCID: <https://orcid.org/0000-0001-8006-9742>),
  V. Forstmeier [aut]
Maintainer: R. Heller <raban.heller@charite.de>