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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "mssrscopR" in publications use:'
type: software
license: MIT
title: 'mssrscopR: Single-Frame Mean-Shift Super-Resolution Structure Maps'
version: 0.2.0.9001
doi: 10.1038/s41467-022-34693-9
identifiers:
- type: url
  value: https://cttir.r-universe.dev/mssrscopR
abstract: Computes the single-frame Mean-Shift Super-Resolution ('MSSR') structure
  map of Torres-Garcia et al. (2022) <https://doi.org/10.1038/s41467-022-34693-9>
  with an independently written implementation that keeps the input orientation, accepts
  non-square frames and defines the result for flat input. Provides output-grid coordinates,
  structural masks for measuring the original data, pixel-wise temporal statistics
  of the per-frame maps of an image sequence (mean, variance and lagged SOFI cumulants
  as defined in the article's supplement), a self-test against bundled synthetic fixtures
  and an interactive 'shiny' app for exploring parameters. Results are structural
  maps, not quantitative intensities; no gain in physical resolution or benefit for
  any application is implied.
authors:
- family-names: Heller
  given-names: R.
  email: raban.heller@uni-ulm.de
  orcid: https://orcid.org/0000-0001-8006-9742
preferred-citation:
  type: article
  title: Extending resolution within a single imaging frame
  authors:
  - family-names: Torres-García
    given-names: Esley
  - family-names: Pinto-Cámara
    given-names: Raúl
  - family-names: Linares
    given-names: Alejandro
  - name: others
  journal: Nature Communications
  year: '2022'
  volume: '13'
  doi: 10.1038/s41467-022-34693-9
  start: '7452'
repository: https://cttir.r-universe.dev
repository-code: https://github.com/CTTIR/mssrscopR
commit: 2758f72ccc0c07e6558987e9c0e39700b3ea1588
url: https://cttir.github.io/mssrscopR/
date-released: '2026-11-03'
contact:
- family-names: Heller
  given-names: R.
  email: raban.heller@uni-ulm.de
  orcid: https://orcid.org/0000-0001-8006-9742
keywords:
- microscopy
- image-processing
- mean-shift
- temporal-statistics
- structural-maps
references:
- type: manual
  title: 'mssrscopR: Single-Frame Mean-Shift Super-Resolution Structure Maps'
  authors:
  - family-names: Heller
    given-names: R.
    email: raban.heller@uni-ulm.de
    orcid: https://orcid.org/0000-0001-8006-9742
  year: '2026'
  notes: R package version 0.2.0.9001
  url: https://github.com/CTTIR/mssrscopR