Package: qupflowR
Title: Connect R and 'Shiny' to 'QuPath' Through a Local Bridge
Version: 0.0.0.9000
Authors@R: person("R.", "Heller", email = "raban.heller@uni-ulm.de",
 role = c("aut", "cre", "cph"))
Description: Development version of an interface between R and the
        'QuPath' 0.7.0 platform for digital pathology image analysis.
        The planned design lets R talk to a local 'Java' bridge (a
        'QuPath' extension and a headless worker) over an authenticated
        loopback protocol, adds a 'Shiny' app that is built on the same
        R functions, and packages analysis workflows so they can be
        shared and run again. This version contains only the package
        foundations: classified error conditions, a message catalogue,
        protocol JSON helpers and a JSON Schema subset validator with
        the protocol schemas, plus a hash-pinned external-method
        execution boundary. The bridge client, the app and the workflow
        engine are not implemented yet.
License: GPL (>= 3)
URL: https://github.com/CTTIR/qupflowR
BugReports: https://github.com/CTTIR/qupflowR/issues
Depends: R (>= 4.5.0)
Imports: cli, jsonlite, stats, tibble, utils
Suggests: bslib, callr, chromote, covr, data.table, digest, DT, fs,
        htmltools, htmlwidgets, httr2, hyperannotatR, knitr, lintr,
        plotly, png, processx, promises, R6, rmarkdown, sf, shiny,
        shinytest2, testthat (>= 3.0.0), tiff, withr, zip
Additional_repositories: https://cttir.r-universe.dev
VignetteBuilder: knitr
SystemRequirements: QuPath (0.7.0) and a Java runtime (25) for the
        optional QuPath bridge; neither is needed to install or load
        the package.
Config/Needs/website: CTTIR/themakR
Config/testthat/edition: 3
Encoding: UTF-8
Language: en-US
Roxygen: list(markdown = TRUE)
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: default-jdk
Repository: https://cttir.r-universe.dev
Date/Publication: 2026-11-04 18:33:55 UTC
RemoteUrl: https://github.com/CTTIR/qupflowR
RemoteRef: HEAD
RemoteSha: 3d65ffc5d0d984770ddc2eba6eed781a5d01d05e
NeedsCompilation: no
Packaged: 2026-11-04 22:05:58 UTC; root
Author: R. Heller [aut, cre, cph]
Maintainer: R. Heller <raban.heller@uni-ulm.de>